Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 AC105339.3-201ENST00000560043 636 ntBASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 AL356488.2-201ENST00000602755 427 ntBASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 LAGE3P1-201ENST00000425356 484 ntBASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 AC132938.6-201ENST00000623828 1655 ntBASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.25■□□□□ 0.83
SYNGAP1Q96PV0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SYNGAP1Q96PV0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 AC096633.1-201ENST00000422446 749 ntBASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 AC005104.2-201ENST00000427818 678 ntBASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 AC079776.2-201ENST00000641154 1609 ntBASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
SYNGAP1Q96PV0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYNGAP1Q96PV0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYNGAP1Q96PV0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SYNGAP1Q96PV0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms