Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 OR2I1P-210ENST00000642037 4691 ntBASIC13.55□□□□□ -0.24
AP1S3Q96PC3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 AC126335.2-201ENST00000623362 4637 ntBASIC13.55□□□□□ -0.24
AP1S3Q96PC3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.54□□□□□ -0.24
AP1S3Q96PC3 AL499627.1-201ENST00000569373 2188 ntBASIC13.54□□□□□ -0.24
AP1S3Q96PC3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 CROCCP5-201ENST00000436658 830 ntBASIC13.54□□□□□ -0.24
AP1S3Q96PC3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.54□□□□□ -0.24
AP1S3Q96PC3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.53□□□□□ -0.24
AP1S3Q96PC3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 SLC25A6P5-201ENST00000435663 894 ntBASIC13.53□□□□□ -0.24
AP1S3Q96PC3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 KRT8P45-201ENST00000414328 1447 ntBASIC13.53□□□□□ -0.24
AP1S3Q96PC3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 NBPF21P-201ENST00000425093 1451 ntBASIC13.53□□□□□ -0.24
AP1S3Q96PC3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 AC135776.1-201ENST00000319817 2481 ntBASIC13.53□□□□□ -0.24
AP1S3Q96PC3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms