Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH3Q96II8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH3Q96II8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH3Q96II8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH3Q96II8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH3Q96II8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH3Q96II8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH3Q96II8 KRT8P50-201ENST00000562022 1438 ntBASIC19.27■□□□□ 0.68
LRCH3Q96II8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH3Q96II8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH3Q96II8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH3Q96II8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 AC022145.2-201ENST00000598203 171 ntBASIC19.27■□□□□ 0.68
LRCH3Q96II8 AC073592.5-201ENST00000624854 528 ntBASIC19.27■□□□□ 0.68
LRCH3Q96II8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH3Q96II8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LRCH3Q96II8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH3Q96II8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH3Q96II8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH3Q96II8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH3Q96II8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH3Q96II8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH3Q96II8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.26■□□□□ 0.67
LRCH3Q96II8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LRCH3Q96II8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LRCH3Q96II8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.26■□□□□ 0.67
LRCH3Q96II8 AC067863.1-201ENST00000494933 530 ntBASIC19.26■□□□□ 0.67
LRCH3Q96II8 CR383656.12-201ENST00000549567 513 ntBASIC19.26■□□□□ 0.67
LRCH3Q96II8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.26■□□□□ 0.67
LRCH3Q96II8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
LRCH3Q96II8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 AC015911.4-201ENST00000588022 1070 ntBASIC19.26■□□□□ 0.67
LRCH3Q96II8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.26■□□□□ 0.67
LRCH3Q96II8 AC010507.1-201ENST00000633895 436 ntBASIC19.26■□□□□ 0.67
LRCH3Q96II8 AC092902.6-201ENST00000641783 218 ntBASIC19.26■□□□□ 0.67
LRCH3Q96II8 AC006504.4-201ENST00000592118 1568 ntBASIC19.26■□□□□ 0.67
LRCH3Q96II8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH3Q96II8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRCH3Q96II8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH3Q96II8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH3Q96II8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH3Q96II8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH3Q96II8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH3Q96II8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH3Q96II8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.25■□□□□ 0.67
LRCH3Q96II8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.25■□□□□ 0.67
LRCH3Q96II8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.25■□□□□ 0.67
LRCH3Q96II8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.25■□□□□ 0.67
LRCH3Q96II8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH3Q96II8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
LRCH3Q96II8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.25■□□□□ 0.67
LRCH3Q96II8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.25■□□□□ 0.67
LRCH3Q96II8 AC009154.2-201ENST00000621177 724 ntBASIC19.25■□□□□ 0.67
LRCH3Q96II8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.25■□□□□ 0.67
LRCH3Q96II8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH3Q96II8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH3Q96II8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.24■□□□□ 0.67
LRCH3Q96II8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.24■□□□□ 0.67
LRCH3Q96II8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH3Q96II8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH3Q96II8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH3Q96II8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH3Q96II8 AC003669.1-201ENST00000334569 611 ntBASIC19.24■□□□□ 0.67
LRCH3Q96II8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH3Q96II8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.24■□□□□ 0.67
LRCH3Q96II8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.24■□□□□ 0.67
LRCH3Q96II8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.24■□□□□ 0.67
LRCH3Q96II8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
LRCH3Q96II8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.24■□□□□ 0.67
LRCH3Q96II8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.24■□□□□ 0.67
LRCH3Q96II8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.24■□□□□ 0.67
LRCH3Q96II8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH3Q96II8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH3Q96II8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH3Q96II8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms