Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 AC098831.1-202ENST00000438821 336 ntBASIC17.88■□□□□ 0.45
SIPA1Q96FS4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 AC122714.2-201ENST00000502787 707 ntBASIC17.88■□□□□ 0.45
SIPA1Q96FS4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 AC145285.3-201ENST00000564603 959 ntBASIC17.88■□□□□ 0.45
SIPA1Q96FS4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 AC107918.4-202ENST00000641623 219 ntBASIC17.88■□□□□ 0.45
SIPA1Q96FS4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 AC073592.3-201ENST00000625118 1834 ntBASIC17.88■□□□□ 0.45
SIPA1Q96FS4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 AC010460.3-201ENST00000511359 1579 ntBASIC17.87■□□□□ 0.45
SIPA1Q96FS4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 AC105339.3-201ENST00000560043 636 ntBASIC17.87■□□□□ 0.45
SIPA1Q96FS4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIPA1Q96FS4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 CROCCP3-202ENST00000420820 1947 ntBASIC17.86■□□□□ 0.45
SIPA1Q96FS4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 AC027601.4-201ENST00000611259 610 ntBASIC17.86■□□□□ 0.45
SIPA1Q96FS4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 KRT8P47-201ENST00000604727 1398 ntBASIC17.86■□□□□ 0.45
SIPA1Q96FS4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 PMPCAP1-201ENST00000508114 1576 ntBASIC17.86■□□□□ 0.45
SIPA1Q96FS4 AC079776.2-201ENST00000641154 1609 ntBASIC17.86■□□□□ 0.45
SIPA1Q96FS4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SIPA1Q96FS4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms