Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 REXO1L11P-201ENST00000620964 1927 ntBASIC18.07■□□□□ 0.48
LRRC39Q96DD0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC39Q96DD0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 AC009053.2-201ENST00000563701 2365 ntBASIC18.05■□□□□ 0.48
LRRC39Q96DD0 AL121761.2-201ENST00000598007 1648 ntBASIC18.05■□□□□ 0.48
LRRC39Q96DD0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 KRT18P22-201ENST00000402024 1347 ntBASIC18.05■□□□□ 0.48
LRRC39Q96DD0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.05■□□□□ 0.48
LRRC39Q96DD0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 AC141257.4-201ENST00000634557 245 ntBASIC18.05■□□□□ 0.48
LRRC39Q96DD0 AC136944.6-201ENST00000634818 245 ntBASIC18.05■□□□□ 0.48
LRRC39Q96DD0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC39Q96DD0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC39Q96DD0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms