Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 GNAS-203ENST00000306120 1878 ntBASIC22.96■■□□□ 1.27
ZNF428Q96B54 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.96■■□□□ 1.27
ZNF428Q96B54 AC068880.1-201ENST00000507289 2297 ntBASIC22.96■■□□□ 1.27
ZNF428Q96B54 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZNF428Q96B54 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.96■■□□□ 1.27
ZNF428Q96B54 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC22.95■■□□□ 1.26
ZNF428Q96B54 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF428Q96B54 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF428Q96B54 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF428Q96B54 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF428Q96B54 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF428Q96B54 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
ZNF428Q96B54 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF428Q96B54 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.95■■□□□ 1.26
ZNF428Q96B54 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF428Q96B54 MRPL3P1-201ENST00000400109 1033 ntBASIC22.95■■□□□ 1.26
ZNF428Q96B54 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC22.95■■□□□ 1.26
ZNF428Q96B54 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.95■■□□□ 1.26
ZNF428Q96B54 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF428Q96B54 MINOS1P3-201ENST00000457048 203 ntBASIC22.95■■□□□ 1.26
ZNF428Q96B54 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC22.95■■□□□ 1.26
ZNF428Q96B54 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC22.95■■□□□ 1.26
ZNF428Q96B54 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC22.95■■□□□ 1.26
ZNF428Q96B54 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.95■■□□□ 1.26
ZNF428Q96B54 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.95■■□□□ 1.26
ZNF428Q96B54 GNE-204ENST00000539208 2190 ntTSL 2 BASIC22.95■■□□□ 1.26
ZNF428Q96B54 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.95■■□□□ 1.26
ZNF428Q96B54 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF428Q96B54 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 CCS-201ENST00000310190 942 ntTSL 5 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC22.94■■□□□ 1.26
ZNF428Q96B54 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF428Q96B54 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.94■■□□□ 1.26
ZNF428Q96B54 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
ZNF428Q96B54 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
ZNF428Q96B54 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC22.93■■□□□ 1.26
ZNF428Q96B54 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC22.93■■□□□ 1.26
ZNF428Q96B54 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.93■■□□□ 1.26
ZNF428Q96B54 AC011840.4-201ENST00000578471 627 ntBASIC22.93■■□□□ 1.26
ZNF428Q96B54 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC22.93■■□□□ 1.26
ZNF428Q96B54 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC22.93■■□□□ 1.26
ZNF428Q96B54 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.93■■□□□ 1.26
ZNF428Q96B54 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
ZNF428Q96B54 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.93■■□□□ 1.26
ZNF428Q96B54 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF428Q96B54 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZNF428Q96B54 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZNF428Q96B54 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZNF428Q96B54 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZNF428Q96B54 AC125634.1-201ENST00000438758 1403 ntBASIC22.92■■□□□ 1.26
ZNF428Q96B54 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
ZNF428Q96B54 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC22.92■■□□□ 1.26
ZNF428Q96B54 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
ZNF428Q96B54 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ZNF428Q96B54 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ZNF428Q96B54 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
ZNF428Q96B54 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZNF428Q96B54 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZNF428Q96B54 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.92■■□□□ 1.26
ZNF428Q96B54 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.92■■□□□ 1.26
ZNF428Q96B54 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC22.92■■□□□ 1.26
ZNF428Q96B54 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC22.92■■□□□ 1.26
ZNF428Q96B54 AL138831.2-201ENST00000606564 490 ntBASIC22.92■■□□□ 1.26
ZNF428Q96B54 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZNF428Q96B54 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.92■■□□□ 1.26
ZNF428Q96B54 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms