Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.37■□□□□ 0.37
NCLNQ969V3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.37■□□□□ 0.37
NCLNQ969V3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.37■□□□□ 0.37
NCLNQ969V3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.37■□□□□ 0.37
NCLNQ969V3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.37■□□□□ 0.37
NCLNQ969V3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NCLNQ969V3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.37■□□□□ 0.37
NCLNQ969V3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.37■□□□□ 0.37
NCLNQ969V3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.37■□□□□ 0.37
NCLNQ969V3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.37■□□□□ 0.37
NCLNQ969V3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NCLNQ969V3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.37■□□□□ 0.37
NCLNQ969V3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.37■□□□□ 0.37
NCLNQ969V3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 AC092647.4-201ENST00000457211 535 ntBASIC17.37■□□□□ 0.37
NCLNQ969V3 AC063952.2-201ENST00000498792 1227 ntBASIC17.37■□□□□ 0.37
NCLNQ969V3 AC022616.7-201ENST00000525383 220 ntBASIC17.37■□□□□ 0.37
NCLNQ969V3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.37■□□□□ 0.37
NCLNQ969V3 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.37■□□□□ 0.37
NCLNQ969V3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.37■□□□□ 0.37
NCLNQ969V3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.37■□□□□ 0.37
NCLNQ969V3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 AL590326.2-201ENST00000625139 305 ntBASIC17.37■□□□□ 0.37
NCLNQ969V3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.37■□□□□ 0.37
NCLNQ969V3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.37■□□□□ 0.37
NCLNQ969V3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLNQ969V3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NCLNQ969V3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.36■□□□□ 0.37
NCLNQ969V3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 MIR564-202ENST00000385049 94 ntBASIC17.36■□□□□ 0.37
NCLNQ969V3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.36■□□□□ 0.37
NCLNQ969V3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.36■□□□□ 0.37
NCLNQ969V3 GCSHP2-201ENST00000560971 527 ntBASIC17.36■□□□□ 0.37
NCLNQ969V3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NCLNQ969V3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NCLNQ969V3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NCLNQ969V3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.36■□□□□ 0.37
NCLNQ969V3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCLNQ969V3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.36■□□□□ 0.37
NCLNQ969V3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.36■□□□□ 0.37
NCLNQ969V3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCLNQ969V3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NCLNQ969V3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NCLNQ969V3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCLNQ969V3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NCLNQ969V3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCLNQ969V3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCLNQ969V3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCLNQ969V3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NCLNQ969V3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NCLNQ969V3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.35■□□□□ 0.37
NCLNQ969V3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.35■□□□□ 0.37
NCLNQ969V3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCLNQ969V3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NCLNQ969V3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NCLNQ969V3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NCLNQ969V3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.35■□□□□ 0.37
NCLNQ969V3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.35■□□□□ 0.37
NCLNQ969V3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.35■□□□□ 0.37
NCLNQ969V3 LINC01238-205ENST00000567549 1107 ntBASIC17.35■□□□□ 0.37
NCLNQ969V3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.35■□□□□ 0.37
NCLNQ969V3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.35■□□□□ 0.37
NCLNQ969V3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCLNQ969V3 NTF6B-201ENST00000591913 560 ntBASIC17.35■□□□□ 0.37
NCLNQ969V3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
NCLNQ969V3 AC024243.1-201ENST00000609234 778 ntBASIC17.35■□□□□ 0.37
NCLNQ969V3 AC112497.1-201ENST00000624824 639 ntBASIC17.35■□□□□ 0.37
NCLNQ969V3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms