Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TM9SF4Q92544 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TM9SF4Q92544 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TM9SF4Q92544 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.9■□□□□ 0.3
TM9SF4Q92544 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.9■□□□□ 0.3
TM9SF4Q92544 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
TM9SF4Q92544 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.89■□□□□ 0.3
TM9SF4Q92544 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TM9SF4Q92544 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 AC064862.7-201ENST00000604520 867 ntBASIC16.89■□□□□ 0.29
TM9SF4Q92544 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 AC068587.9-201ENST00000641814 219 ntBASIC16.89■□□□□ 0.29
TM9SF4Q92544 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 AL353692.3-201ENST00000407031 1396 ntBASIC16.89■□□□□ 0.29
TM9SF4Q92544 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.89■□□□□ 0.29
TM9SF4Q92544 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM9SF4Q92544 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 KRT16P4-201ENST00000453883 522 ntBASIC16.88■□□□□ 0.29
TM9SF4Q92544 MINOS1P3-201ENST00000457048 203 ntBASIC16.88■□□□□ 0.29
TM9SF4Q92544 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 AL121912.1-201ENST00000603683 238 ntBASIC16.88■□□□□ 0.29
TM9SF4Q92544 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.88■□□□□ 0.29
TM9SF4Q92544 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.88■□□□□ 0.29
TM9SF4Q92544 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM9SF4Q92544 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TM9SF4Q92544 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TM9SF4Q92544 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TM9SF4Q92544 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM9SF4Q92544 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
TM9SF4Q92544 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM9SF4Q92544 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM9SF4Q92544 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TM9SF4Q92544 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM9SF4Q92544 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM9SF4Q92544 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TM9SF4Q92544 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM9SF4Q92544 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TM9SF4Q92544 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms