Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 AC068880.1-201ENST00000507289 2297 ntBASIC16.11■□□□□ 0.17
RNF138Q8WVD3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 AC132008.2-207ENST00000454517 770 ntBASIC16.11■□□□□ 0.17
RNF138Q8WVD3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 AC111152.3-201ENST00000569699 673 ntBASIC16.11■□□□□ 0.17
RNF138Q8WVD3 AP001269.4-201ENST00000609611 512 ntBASIC16.11■□□□□ 0.17
RNF138Q8WVD3 AC073592.4-201ENST00000623827 446 ntBASIC16.11■□□□□ 0.17
RNF138Q8WVD3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 GNAS-203ENST00000306120 1878 ntBASIC16.11■□□□□ 0.17
RNF138Q8WVD3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 HLA-J-201ENST00000462773 1622 ntBASIC16.11■□□□□ 0.17
RNF138Q8WVD3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 KRT8P10-201ENST00000450021 1447 ntBASIC16.11■□□□□ 0.17
RNF138Q8WVD3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 RBM17P3-201ENST00000417687 1192 ntBASIC16.1■□□□□ 0.17
RNF138Q8WVD3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 STK25P1-201ENST00000585406 838 ntBASIC16.1■□□□□ 0.17
RNF138Q8WVD3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 SIRPAP1-201ENST00000448467 1770 ntBASIC16.1■□□□□ 0.17
RNF138Q8WVD3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 AP005117.1-201ENST00000584346 1413 ntBASIC16.1■□□□□ 0.17
RNF138Q8WVD3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF138Q8WVD3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms