Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 CR392000.1-201ENST00000624770 1228 ntBASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.85■□□□□ 0.45
RAB3IL1Q8TBN0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB3IL1Q8TBN0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAB3IL1Q8TBN0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.83■□□□□ 0.45
RAB3IL1Q8TBN0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.83■□□□□ 0.45
RAB3IL1Q8TBN0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAB3IL1Q8TBN0 FSCN1P1-201ENST00000568912 1481 ntBASIC17.83■□□□□ 0.45
RAB3IL1Q8TBN0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB3IL1Q8TBN0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RAB3IL1Q8TBN0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAB3IL1Q8TBN0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
RAB3IL1Q8TBN0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB3IL1Q8TBN0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB3IL1Q8TBN0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 CA15P1-201ENST00000481698 905 ntBASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RAB3IL1Q8TBN0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 TNRC18P3-201ENST00000441896 2691 ntBASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms