Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 PRYP5-201ENST00000451909 266 ntBASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 LINC00602-201ENST00000629776 2065 ntBASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 ELL2P1-201ENST00000413990 1906 ntBASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNIP1Q8TAD8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 STK33P1-201ENST00000423835 1218 ntBASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 COX20P2-201ENST00000452636 358 ntBASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SNIP1Q8TAD8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 CRYGEP-201ENST00000412192 528 ntBASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 AC092865.6-201ENST00000642101 219 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms