Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 AP003733.1-201ENST00000491725 852 ntBASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 FLJ13224-201ENST00000313737 1514 ntBASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.86■□□□□ 0.29
SIMC1Q8NDZ2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 AC012317.2-201ENST00000623305 2251 ntBASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 IGHGP-201ENST00000390555 1178 ntBASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 LINC01238-205ENST00000567549 1107 ntBASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 AC005332.3-201ENST00000589904 676 ntBASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 KRT89P-201ENST00000620027 1478 ntBASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
SIMC1Q8NDZ2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 SIRPAP1-201ENST00000448467 1770 ntBASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 AL356309.3-201ENST00000624132 1934 ntBASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 BCL2-203ENST00000589955 5011 ntBASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.84■□□□□ 0.29
SIMC1Q8NDZ2 AL645929.1-201ENST00000420084 975 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms