Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 AC074051.2-201ENST00000565115 352 ntBASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 LINC01711-201ENST00000598340 967 ntBASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC33Q8N5R6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CCDC33Q8N5R6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC33Q8N5R6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC33Q8N5R6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC33Q8N5R6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC33Q8N5R6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 AC079781.3-201ENST00000449110 356 ntBASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 KRT18P31-201ENST00000506277 1292 ntBASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 NOC2LP2-201ENST00000407594 1944 ntBASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC33Q8N5R6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 GPR32P1-201ENST00000601788 811 ntBASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC33Q8N5R6 AC090340.1-201ENST00000620778 4980 ntBASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms