Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 AC112482.1-201ENST00000492080 688 ntBASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 AC009154.2-201ENST00000621177 724 ntBASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 KRT18P28-201ENST00000453838 1332 ntBASIC16.17■□□□□ 0.18
RP1L1Q8IWN7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 AL024508.2-201ENST00000607749 1894 ntBASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 LINC00602-201ENST00000629776 2065 ntBASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 AC108751.1-201ENST00000490852 363 ntBASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 AC254562.1-201ENST00000417586 456 ntBASIC16.16■□□□□ 0.18
RP1L1Q8IWN7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 AC125634.1-201ENST00000438758 1403 ntBASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 AC136632.2-201ENST00000512891 861 ntBASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 SDHAP2-201ENST00000455183 2001 ntBASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
RP1L1Q8IWN7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
RP1L1Q8IWN7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.14■□□□□ 0.18
RP1L1Q8IWN7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
RP1L1Q8IWN7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RP1L1Q8IWN7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.14■□□□□ 0.18
RP1L1Q8IWN7 MIR3197-201ENST00000582241 73 ntBASIC16.14■□□□□ 0.18
RP1L1Q8IWN7 AC107918.4-202ENST00000641623 219 ntBASIC16.14■□□□□ 0.18
RP1L1Q8IWN7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RP1L1Q8IWN7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RP1L1Q8IWN7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RP1L1Q8IWN7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.14■□□□□ 0.17
RP1L1Q8IWN7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.14■□□□□ 0.17
RP1L1Q8IWN7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.14■□□□□ 0.17
RP1L1Q8IWN7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RP1L1Q8IWN7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RP1L1Q8IWN7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RP1L1Q8IWN7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms