Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.452e-11■□□□□ 10.5
LARP4Q71RC2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.74□□□□□ -0.212e-11■□□□□ 10.5
LARP4Q71RC2 RPL8-209ENST00000529920 876 ntTSL 215.78■□□□□ 0.126e-11■□□□□ 10.5
LARP4Q71RC2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.016e-11■□□□□ 10.5
LARP4Q71RC2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.59■□□□□ 0.577e-7■□□□□ 10.5
LARP4Q71RC2 CNIH4-206ENST00000468318 1525 ntTSL 216.93■□□□□ 0.37e-7■□□□□ 10.5
LARP4Q71RC2 CNIH4-204ENST00000366860 912 ntTSL 314.87□□□□□ -0.037e-7■□□□□ 10.5
LARP4Q71RC2 CNIH4-202ENST00000366857 3963 ntTSL 1 (best) BASIC9.27□□□□□ -0.937e-7■□□□□ 10.5
LARP4Q71RC2 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.027e-7■□□□□ 10.5
LARP4Q71RC2 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.467e-7■□□□□ 10.5
LARP4Q71RC2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.882e-9■□□□□ 10.5
LARP4Q71RC2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.01■□□□□ 0.472e-9■□□□□ 10.5
LARP4Q71RC2 NDUFAF3-205ENST00000480392 769 ntTSL 217.58■□□□□ 0.42e-9■□□□□ 10.5
LARP4Q71RC2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.12■□□□□ 0.012e-9■□□□□ 10.5
LARP4Q71RC2 NDUFAF3-201ENST00000326912 705 ntTSL 2 BASIC11.41□□□□□ -0.582e-9■□□□□ 10.5
LARP4Q71RC2 NDUFAF3-206ENST00000496152 826 ntTSL 210.88□□□□□ -0.672e-9■□□□□ 10.5
LARP4Q71RC2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.74e-9■□□□□ 10.5
LARP4Q71RC2 TUBG1-204ENST00000589688 1505 ntTSL 512.76□□□□□ -0.374e-9■□□□□ 10.5
LARP4Q71RC2 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.111e-33■□□□□ 10.5
LARP4Q71RC2 FGG-204ENST00000405164 1539 ntTSL 5 BASIC6.96□□□□□ -1.31e-33■□□□□ 10.5
LARP4Q71RC2 FGG-209ENST00000465913 1573 ntTSL 26.6□□□□□ -1.351e-33■□□□□ 10.5
LARP4Q71RC2 FGG-212ENST00000492082 2031 ntTSL 56.55□□□□□ -1.361e-33■□□□□ 10.5
LARP4Q71RC2 PPIF-202ENST00000448165 821 ntTSL 214.08□□□□□ -0.162e-6■□□□□ 10.5
LARP4Q71RC2 TM9SF2-201ENST00000376387 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.571e-6■□□□□ 10.5
LARP4Q71RC2 FCGRT-203ENST00000452439 1351 ntTSL 216.29■□□□□ 0.29e-10■□□□□ 10.5
LARP4Q71RC2 FCGRT-212ENST00000598319 1888 ntTSL 515.34■□□□□ 0.059e-10■□□□□ 10.5
LARP4Q71RC2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.75■■□□□ 1.231e-6■□□□□ 10.5
LARP4Q71RC2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.231e-6■□□□□ 10.5
LARP4Q71RC2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.231e-6■□□□□ 10.5
LARP4Q71RC2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.21e-6■□□□□ 10.5
LARP4Q71RC2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.11e-6■□□□□ 10.5
LARP4Q71RC2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.81■■□□□ 1.081e-6■□□□□ 10.5
LARP4Q71RC2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.681e-6■□□□□ 10.5
LARP4Q71RC2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.411e-6■□□□□ 10.5
LARP4Q71RC2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.71■□□□□ 0.753e-7■□□□□ 10.5
LARP4Q71RC2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.384e-12■□□□□ 10.5
LARP4Q71RC2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.044e-12■□□□□ 10.5
LARP4Q71RC2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.023e-7■□□□□ 10.5
LARP4Q71RC2 DHCR7-212ENST00000534795 979 ntTSL 1 (best)12.51□□□□□ -0.414e-12■□□□□ 10.5
LARP4Q71RC2 MRPS7-206ENST00000583407 864 ntTSL 39.99□□□□□ -0.817e-7■□□□□ 10.5
LARP4Q71RC2 METTL26-208ENST00000564039 518 ntTSL 215.43■□□□□ 0.064e-13■□□□□ 10.5
LARP4Q71RC2 METTL26-207ENST00000456420 755 ntTSL 316.04■□□□□ 0.164e-13■□□□□ 10.5
LARP4Q71RC2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.3□□□□□ -0.124e-13■□□□□ 10.5
LARP4Q71RC2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.227e-11■□□□□ 10.5
LARP4Q71RC2 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.297e-11■□□□□ 10.5
LARP4Q71RC2 RPL14-207ENST00000465325 788 ntTSL 36.13□□□□□ -1.437e-11■□□□□ 10.5
LARP4Q71RC2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.36e-7■□□□□ 10.5
LARP4Q71RC2 MAPK3-207ENST00000466521 1878 ntTSL 529.44■■■□□ 2.36e-7■□□□□ 10.5
LARP4Q71RC2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.91■■■□□ 2.226e-7■□□□□ 10.5
LARP4Q71RC2 MAPK3-214ENST00000490298 1718 ntTSL 525.42■■□□□ 1.666e-7■□□□□ 10.5
LARP4Q71RC2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.88■□□□□ 0.136e-7■□□□□ 10.5
LARP4Q71RC2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.122e-6■□□□□ 10.5
LARP4Q71RC2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.272e-6■□□□□ 10.5
LARP4Q71RC2 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.472e-6■□□□□ 10.5
LARP4Q71RC2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.931e-12■□□□□ 10.5
LARP4Q71RC2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.931e-12■□□□□ 10.5
LARP4Q71RC2 SRSF9-203ENST00000548326 1704 nt8.68□□□□□ -1.022e-7■□□□□ 10.5
LARP4Q71RC2 PTMS-206ENST00000540874 501 ntTSL 217■□□□□ 0.314e-13■□□□□ 10.5
LARP4Q71RC2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.74■□□□□ 0.274e-13■□□□□ 10.5
LARP4Q71RC2 TPM3-202ENST00000302206 741 ntTSL 3 BASIC11.79□□□□□ -0.524e-13■□□□□ 10.5
LARP4Q71RC2 RPL38-205ENST00000530646 2450 ntTSL 1 (best)18.13■□□□□ 0.493e-42■□□□□ 10.5
LARP4Q71RC2 RPL38-203ENST00000528433 169 ntTSL 511.96□□□□□ -0.493e-42■□□□□ 10.5
LARP4Q71RC2 RPL38-204ENST00000529123 576 ntTSL 29.57□□□□□ -0.883e-42■□□□□ 10.5
LARP4Q71RC2 NEU4-210ENST00000428592 505 ntTSL 415.59■□□□□ 0.093e-6■□□□□ 10.5
LARP4Q71RC2 GSN-201ENST00000373806 879 ntTSL 217.44■□□□□ 0.382e-60■□□□□ 10.5
LARP4Q71RC2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.7■□□□□ 0.12e-60■□□□□ 10.5
LARP4Q71RC2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.42■□□□□ 0.062e-60■□□□□ 10.5
LARP4Q71RC2 GSN-211ENST00000477553 680 ntTSL 211.74□□□□□ -0.532e-60■□□□□ 10.5
LARP4Q71RC2 TRMT112-204ENST00000537918 559 ntTSL 1 (best)17.26■□□□□ 0.354e-8■□□□□ 10.5
LARP4Q71RC2 PCF11-203ENST00000530304 2649 ntTSL 1 (best)19.55■□□□□ 0.724e-17■□□□□ 10.5
LARP4Q71RC2 PCF11-207ENST00000624931 1720 nt17.46■□□□□ 0.394e-17■□□□□ 10.5
LARP4Q71RC2 PCF11-206ENST00000533018 580 ntTSL 316.21■□□□□ 0.194e-17■□□□□ 10.5
LARP4Q71RC2 PCF11-204ENST00000530660 3309 ntTSL 214.01□□□□□ -0.174e-17■□□□□ 10.5
LARP4Q71RC2 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.64e-17■□□□□ 10.5
LARP4Q71RC2 RNASE4-201ENST00000397995 853 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.872e-7■□□□□ 10.5
LARP4Q71RC2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.874e-6■□□□□ 10.5
LARP4Q71RC2 MFSD3-203ENST00000528047 1433 ntTSL 320.27■□□□□ 0.834e-6■□□□□ 10.5
LARP4Q71RC2 MFSD3-204ENST00000534427 849 ntTSL 215.64■□□□□ 0.094e-6■□□□□ 10.5
LARP4Q71RC2 SAFB-213ENST00000592555 1360 ntTSL 517.45■□□□□ 0.381e-8■□□□□ 10.5
LARP4Q71RC2 SAFB-207ENST00000589863 2708 ntTSL 217.03■□□□□ 0.321e-8■□□□□ 10.5
LARP4Q71RC2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.169e-15■□□□□ 10.5
LARP4Q71RC2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.041e-8■□□□□ 10.5
LARP4Q71RC2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.011e-8■□□□□ 10.5
LARP4Q71RC2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.031e-8■□□□□ 10.5
LARP4Q71RC2 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.171e-8■□□□□ 10.5
LARP4Q71RC2 AUP1-208ENST00000486234 984 ntTSL 512.26□□□□□ -0.451e-8■□□□□ 10.5
LARP4Q71RC2 SAFB-210ENST00000591991 3471 ntTSL 211.85□□□□□ -0.511e-8■□□□□ 10.5
LARP4Q71RC2 AUP1-203ENST00000462297 457 ntTSL 39.22□□□□□ -0.931e-8■□□□□ 10.5
LARP4Q71RC2 STT3B-206ENST00000463044 912 ntTSL 35.13□□□□□ -1.599e-15■□□□□ 10.5
LARP4Q71RC2 STT3B-207ENST00000488151 436 ntTSL 25.03□□□□□ -1.69e-15■□□□□ 10.5
LARP4Q71RC2 RPL24-203ENST00000469605 799 ntTSL 2 BASIC9.85□□□□□ -0.838e-12■□□□□ 10.5
LARP4Q71RC2 RPL24-202ENST00000464595 668 ntTSL 1 (best)7.48□□□□□ -1.218e-12■□□□□ 10.5
LARP4Q71RC2 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.268e-12■□□□□ 10.5
LARP4Q71RC2 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.12□□□□□ -1.438e-12■□□□□ 10.5
LARP4Q71RC2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.2■□□□□ 0.188e-19■□□□□ 10.5
LARP4Q71RC2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.058e-19■□□□□ 10.5
LARP4Q71RC2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.36■□□□□ 0.058e-19■□□□□ 10.5
LARP4Q71RC2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.39□□□□□ -0.118e-19■□□□□ 10.5
LARP4Q71RC2 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.338e-19■□□□□ 10.5
LARP4Q71RC2 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC7.95□□□□□ -1.148e-19■□□□□ 10.5
Retrieved 100 of 15,922 protein–RNA pairs in 173.5 ms