Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF111Q6ZNA4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 KRT18P57-201ENST00000443599 1254 ntBASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF111Q6ZNA4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 MIR564-202ENST00000385049 94 ntBASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 AC009947.2-201ENST00000444014 672 ntBASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 AC141257.4-201ENST00000634557 245 ntBASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 AC136944.6-201ENST00000634818 245 ntBASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 AL391005.1-201ENST00000623953 2435 ntBASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF111Q6ZNA4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 AP000523.1-201ENST00000398242 1049 ntBASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 AL138966.2-201ENST00000621997 464 ntBASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 AC092865.7-201ENST00000641832 219 ntBASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF111Q6ZNA4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms