Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 AC068587.9-201ENST00000641814 219 ntBASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 KRT18P68-201ENST00000392293 1000 ntBASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 KRT18P61-201ENST00000585825 1298 ntBASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 HYMAI-201ENST00000635591 3347 ntBASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.88□□□□□ -0.19
KCNIP4Q6PIL6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 AC124283.5-201ENST00000624661 1809 ntBASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms