Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 AL354751.1-201ENST00000412768 1863 ntBASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 NEFHP1-201ENST00000412845 2629 ntBASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DQA1Q5Y7H0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 AL390961.4-201ENST00000623958 2535 ntBASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC138028.4-201ENST00000564984 1845 ntBASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 MTCL1P1-201ENST00000446207 792 ntBASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC068472.1-201ENST00000474589 881 ntBASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 AP002414.4-201ENST00000589764 1148 ntBASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC116407.2-201ENST00000613639 860 ntBASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQA1Q5Y7H0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA1Q5Y7H0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQA1Q5Y7H0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DQA1Q5Y7H0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms