Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 NUS1P2-201ENST00000417358 873 ntBASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 AC007967.3-201ENST00000434308 558 ntBASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 AC122714.2-201ENST00000502787 707 ntBASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 AC111152.3-201ENST00000569699 673 ntBASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 AL591684.3-201ENST00000605187 298 ntBASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC178Q5BJE1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 COX5BP2-201ENST00000392354 334 ntBASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 RCN1P2-201ENST00000398357 915 ntBASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 INTS4P1-201ENST00000438455 1935 ntBASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC178Q5BJE1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 AL691432.3-201ENST00000621860 400 ntBASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CCDC178Q5BJE1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC178Q5BJE1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC178Q5BJE1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC178Q5BJE1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC178Q5BJE1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC178Q5BJE1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC178Q5BJE1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC178Q5BJE1 AC103564.2-201ENST00000432853 1299 ntBASIC20.86■□□□□ 0.93
CCDC178Q5BJE1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC178Q5BJE1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC178Q5BJE1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC178Q5BJE1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC178Q5BJE1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms