Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42EP1Q00587 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.45■□□□□ 0.7
CDC42EP1Q00587 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDC42EP1Q00587 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42EP1Q00587 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CDC42EP1Q00587 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42EP1Q00587 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42EP1Q00587 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42EP1Q00587 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42EP1Q00587 HCG11-201ENST00000411553 5696 ntBASIC19.45■□□□□ 0.7
CDC42EP1Q00587 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42EP1Q00587 AL049757.1-201ENST00000616842 1596 ntBASIC19.44■□□□□ 0.7
CDC42EP1Q00587 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 KRT18P55-202ENST00000578578 1546 ntBASIC19.43■□□□□ 0.7
CDC42EP1Q00587 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 SPDYE21P-201ENST00000413323 827 ntBASIC19.43■□□□□ 0.7
CDC42EP1Q00587 AP000347.1-202ENST00000435868 847 ntBASIC19.43■□□□□ 0.7
CDC42EP1Q00587 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 AC025062.2-201ENST00000605477 670 ntBASIC19.43■□□□□ 0.7
CDC42EP1Q00587 AC073592.5-201ENST00000624854 528 ntBASIC19.43■□□□□ 0.7
CDC42EP1Q00587 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.43■□□□□ 0.7
CDC42EP1Q00587 AC107918.4-202ENST00000641623 219 ntBASIC19.43■□□□□ 0.7
CDC42EP1Q00587 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42EP1Q00587 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.42■□□□□ 0.7
CDC42EP1Q00587 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 AL020989.1-201ENST00000422979 469 ntBASIC19.42■□□□□ 0.7
CDC42EP1Q00587 LAGE3P1-201ENST00000425356 484 ntBASIC19.42■□□□□ 0.7
CDC42EP1Q00587 RPS2P1-201ENST00000434010 821 ntBASIC19.42■□□□□ 0.7
CDC42EP1Q00587 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42EP1Q00587 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms