Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.19■□□□□ 0.82
USP11P51784 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.19■□□□□ 0.82
USP11P51784 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.19■□□□□ 0.82
USP11P51784 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
USP11P51784 AC138894.3-201ENST00000603787 634 ntBASIC20.19■□□□□ 0.82
USP11P51784 AC012313.10-201ENST00000623509 926 ntBASIC20.19■□□□□ 0.82
USP11P51784 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.19■□□□□ 0.82
USP11P51784 LETM1P2-201ENST00000597330 2178 ntBASIC20.19■□□□□ 0.82
USP11P51784 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP11P51784 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP11P51784 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP11P51784 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.19■□□□□ 0.82
USP11P51784 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP11P51784 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.19■□□□□ 0.82
USP11P51784 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.19■□□□□ 0.82
USP11P51784 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.19■□□□□ 0.82
USP11P51784 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.18■□□□□ 0.82
USP11P51784 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.18■□□□□ 0.82
USP11P51784 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.18■□□□□ 0.82
USP11P51784 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
USP11P51784 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.18■□□□□ 0.82
USP11P51784 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
USP11P51784 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 FAM220CP-201ENST00000395253 831 ntBASIC20.18■□□□□ 0.82
USP11P51784 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 AC122714.2-201ENST00000502787 707 ntBASIC20.18■□□□□ 0.82
USP11P51784 KRT18P31-201ENST00000506277 1292 ntBASIC20.18■□□□□ 0.82
USP11P51784 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.18■□□□□ 0.82
USP11P51784 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.18■□□□□ 0.82
USP11P51784 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
USP11P51784 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
USP11P51784 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP11P51784 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.17■□□□□ 0.82
USP11P51784 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.17■□□□□ 0.82
USP11P51784 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.17■□□□□ 0.82
USP11P51784 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.17■□□□□ 0.82
USP11P51784 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.17■□□□□ 0.82
USP11P51784 AC091304.2-201ENST00000564639 760 ntBASIC20.17■□□□□ 0.82
USP11P51784 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.17■□□□□ 0.82
USP11P51784 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.17■□□□□ 0.82
USP11P51784 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
USP11P51784 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
USP11P51784 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
USP11P51784 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 AC008764.6-201ENST00000595909 2069 ntBASIC20.17■□□□□ 0.82
USP11P51784 BX276092.7-203ENST00000637198 1536 ntBASIC20.17■□□□□ 0.82
USP11P51784 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP11P51784 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
USP11P51784 NUS1P2-201ENST00000417358 873 ntBASIC20.16■□□□□ 0.82
USP11P51784 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.16■□□□□ 0.82
USP11P51784 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.16■□□□□ 0.82
USP11P51784 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
USP11P51784 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.16■□□□□ 0.82
USP11P51784 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.16■□□□□ 0.82
USP11P51784 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 AC006116.8-202ENST00000587620 1550 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms