Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDE6CP51160 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6CP51160 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6CP51160 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6CP51160 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6CP51160 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
PDE6CP51160 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6CP51160 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6CP51160 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6CP51160 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6CP51160 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.33■□□□□ 0.69
PDE6CP51160 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6CP51160 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PDE6CP51160 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6CP51160 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6CP51160 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
PDE6CP51160 MIR662-201ENST00000384847 95 ntBASIC19.33■□□□□ 0.68
PDE6CP51160 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6CP51160 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.33■□□□□ 0.68
PDE6CP51160 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.33■□□□□ 0.68
PDE6CP51160 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
PDE6CP51160 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.33■□□□□ 0.68
PDE6CP51160 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.33■□□□□ 0.68
PDE6CP51160 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.33■□□□□ 0.68
PDE6CP51160 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.33■□□□□ 0.68
PDE6CP51160 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6CP51160 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6CP51160 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
PDE6CP51160 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.33■□□□□ 0.68
PDE6CP51160 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6CP51160 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6CP51160 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PDE6CP51160 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PDE6CP51160 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.32■□□□□ 0.68
PDE6CP51160 KRT18P55-202ENST00000578578 1546 ntBASIC19.32■□□□□ 0.68
PDE6CP51160 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.32■□□□□ 0.68
PDE6CP51160 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PDE6CP51160 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PDE6CP51160 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.32■□□□□ 0.68
PDE6CP51160 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.32■□□□□ 0.68
PDE6CP51160 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.32■□□□□ 0.68
PDE6CP51160 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.32■□□□□ 0.68
PDE6CP51160 AC079602.3-201ENST00000623931 403 ntBASIC19.32■□□□□ 0.68
PDE6CP51160 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
PDE6CP51160 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.32■□□□□ 0.68
PDE6CP51160 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.32■□□□□ 0.68
PDE6CP51160 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PDE6CP51160 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.32■□□□□ 0.68
PDE6CP51160 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6CP51160 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
PDE6CP51160 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.31■□□□□ 0.68
PDE6CP51160 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.31■□□□□ 0.68
PDE6CP51160 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PDE6CP51160 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
PDE6CP51160 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PDE6CP51160 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.31■□□□□ 0.68
PDE6CP51160 DUTP2-201ENST00000519164 463 ntBASIC19.31■□□□□ 0.68
PDE6CP51160 KRT8P26-201ENST00000534154 1276 ntBASIC19.31■□□□□ 0.68
PDE6CP51160 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.31■□□□□ 0.68
PDE6CP51160 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.31■□□□□ 0.68
PDE6CP51160 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PDE6CP51160 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.31■□□□□ 0.68
PDE6CP51160 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6CP51160 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PDE6CP51160 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6CP51160 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6CP51160 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PDE6CP51160 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms