Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.46■□□□□ 0.39
CSNK1EP49674 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.46■□□□□ 0.39
CSNK1EP49674 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1EP49674 AC136632.2-201ENST00000512891 861 ntBASIC17.46■□□□□ 0.39
CSNK1EP49674 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.46■□□□□ 0.39
CSNK1EP49674 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.46■□□□□ 0.39
CSNK1EP49674 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.46■□□□□ 0.39
CSNK1EP49674 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
CSNK1EP49674 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CSNK1EP49674 MTDHP5-201ENST00000598980 586 ntBASIC17.46■□□□□ 0.39
CSNK1EP49674 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1EP49674 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CSNK1EP49674 AC073592.5-201ENST00000624854 528 ntBASIC17.46■□□□□ 0.39
CSNK1EP49674 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1EP49674 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1EP49674 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1EP49674 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1EP49674 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1EP49674 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CSNK1EP49674 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1EP49674 SIGLEC16-201ENST00000599858 1437 ntBASIC17.46■□□□□ 0.39
CSNK1EP49674 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1EP49674 SIRPAP1-201ENST00000448467 1770 ntBASIC17.45■□□□□ 0.38
CSNK1EP49674 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.45■□□□□ 0.38
CSNK1EP49674 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CSNK1EP49674 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CSNK1EP49674 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.45■□□□□ 0.38
CSNK1EP49674 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CSNK1EP49674 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CSNK1EP49674 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CSNK1EP49674 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.45■□□□□ 0.38
CSNK1EP49674 KRT18P2-201ENST00000447938 1258 ntBASIC17.45■□□□□ 0.38
CSNK1EP49674 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.45■□□□□ 0.38
CSNK1EP49674 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.45■□□□□ 0.38
CSNK1EP49674 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.45■□□□□ 0.38
CSNK1EP49674 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.45■□□□□ 0.38
CSNK1EP49674 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.45■□□□□ 0.38
CSNK1EP49674 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.45■□□□□ 0.38
CSNK1EP49674 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.45■□□□□ 0.38
CSNK1EP49674 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.45■□□□□ 0.38
CSNK1EP49674 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1EP49674 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.45■□□□□ 0.38
CSNK1EP49674 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CSNK1EP49674 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CSNK1EP49674 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.44■□□□□ 0.38
CSNK1EP49674 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1EP49674 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CSNK1EP49674 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CSNK1EP49674 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.44■□□□□ 0.38
CSNK1EP49674 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.44■□□□□ 0.38
CSNK1EP49674 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.44■□□□□ 0.38
CSNK1EP49674 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.44■□□□□ 0.38
CSNK1EP49674 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1EP49674 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.44■□□□□ 0.38
CSNK1EP49674 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.44■□□□□ 0.38
CSNK1EP49674 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1EP49674 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1EP49674 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CSNK1EP49674 AC093010.1-201ENST00000473625 1624 ntBASIC17.43■□□□□ 0.38
CSNK1EP49674 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1EP49674 AL031598.1-201ENST00000561511 1773 ntBASIC17.43■□□□□ 0.38
CSNK1EP49674 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1EP49674 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CSNK1EP49674 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1EP49674 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1EP49674 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1EP49674 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1EP49674 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CSNK1EP49674 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CSNK1EP49674 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1EP49674 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CSNK1EP49674 COX5BP2-201ENST00000392354 334 ntBASIC17.43■□□□□ 0.38
CSNK1EP49674 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms