Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.6□□□□□ -0.07
CEACAM3P40198 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.6□□□□□ -0.07
CEACAM3P40198 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.6□□□□□ -0.07
CEACAM3P40198 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.6□□□□□ -0.07
CEACAM3P40198 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.6□□□□□ -0.07
CEACAM3P40198 AC069148.1-201ENST00000608741 768 ntBASIC14.6□□□□□ -0.07
CEACAM3P40198 IGHV3-41-201ENST00000613121 348 ntBASIC14.6□□□□□ -0.07
CEACAM3P40198 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.6□□□□□ -0.07
CEACAM3P40198 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.6□□□□□ -0.07
CEACAM3P40198 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.6□□□□□ -0.07
CEACAM3P40198 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.6□□□□□ -0.07
CEACAM3P40198 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CEACAM3P40198 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CEACAM3P40198 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.6□□□□□ -0.07
CEACAM3P40198 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.6□□□□□ -0.07
CEACAM3P40198 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CEACAM3P40198 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CEACAM3P40198 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.6□□□□□ -0.07
CEACAM3P40198 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.6□□□□□ -0.07
CEACAM3P40198 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.59□□□□□ -0.07
CEACAM3P40198 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CEACAM3P40198 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.59□□□□□ -0.07
CEACAM3P40198 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 CHCHD2P8-201ENST00000429873 447 ntBASIC14.59□□□□□ -0.07
CEACAM3P40198 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.59□□□□□ -0.07
CEACAM3P40198 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.59□□□□□ -0.07
CEACAM3P40198 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.59□□□□□ -0.07
CEACAM3P40198 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CEACAM3P40198 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CEACAM3P40198 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CEACAM3P40198 AL390961.4-201ENST00000623958 2535 ntBASIC14.59□□□□□ -0.07
CEACAM3P40198 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.59□□□□□ -0.07
CEACAM3P40198 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.59□□□□□ -0.07
CEACAM3P40198 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.59□□□□□ -0.07
CEACAM3P40198 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CEACAM3P40198 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CEACAM3P40198 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.58□□□□□ -0.07
CEACAM3P40198 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CEACAM3P40198 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.58□□□□□ -0.07
CEACAM3P40198 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CEACAM3P40198 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CEACAM3P40198 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CEACAM3P40198 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CEACAM3P40198 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CEACAM3P40198 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CEACAM3P40198 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.58□□□□□ -0.08
CEACAM3P40198 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.58□□□□□ -0.08
CEACAM3P40198 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CEACAM3P40198 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CEACAM3P40198 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CEACAM3P40198 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.58□□□□□ -0.08
CEACAM3P40198 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CEACAM3P40198 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CEACAM3P40198 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.58□□□□□ -0.08
CEACAM3P40198 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.58□□□□□ -0.08
CEACAM3P40198 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.58□□□□□ -0.08
CEACAM3P40198 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.58□□□□□ -0.08
CEACAM3P40198 AC011840.4-201ENST00000578471 627 ntBASIC14.58□□□□□ -0.08
CEACAM3P40198 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CEACAM3P40198 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CEACAM3P40198 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.58□□□□□ -0.08
CEACAM3P40198 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CEACAM3P40198 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.58□□□□□ -0.08
CEACAM3P40198 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CEACAM3P40198 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CEACAM3P40198 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CEACAM3P40198 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CEACAM3P40198 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.58□□□□□ -0.08
CEACAM3P40198 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.58□□□□□ -0.08
CEACAM3P40198 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CEACAM3P40198 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CEACAM3P40198 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms