Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.07■□□□□ 0.16
SOX6P35712 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX6P35712 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SOX6P35712 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX6P35712 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX6P35712 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX6P35712 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX6P35712 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX6P35712 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOX6P35712 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX6P35712 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX6P35712 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.07■□□□□ 0.16
SOX6P35712 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX6P35712 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SOX6P35712 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX6P35712 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX6P35712 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SOX6P35712 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SOX6P35712 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX6P35712 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.06■□□□□ 0.16
SOX6P35712 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
SOX6P35712 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SOX6P35712 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SOX6P35712 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SOX6P35712 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX6P35712 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX6P35712 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX6P35712 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SOX6P35712 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX6P35712 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX6P35712 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SOX6P35712 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX6P35712 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX6P35712 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX6P35712 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.06■□□□□ 0.16
SOX6P35712 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SOX6P35712 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX6P35712 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SOX6P35712 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SOX6P35712 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SOX6P35712 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SOX6P35712 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX6P35712 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SOX6P35712 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SOX6P35712 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX6P35712 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
SOX6P35712 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SOX6P35712 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX6P35712 AP000593.1-201ENST00000393668 712 ntBASIC16.05■□□□□ 0.16
SOX6P35712 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.05■□□□□ 0.16
SOX6P35712 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX6P35712 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.05■□□□□ 0.16
SOX6P35712 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.05■□□□□ 0.16
SOX6P35712 AC091874.3-201ENST00000512672 1195 ntBASIC16.05■□□□□ 0.16
SOX6P35712 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX6P35712 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX6P35712 AC006557.6-201ENST00000623071 864 ntBASIC16.05■□□□□ 0.16
SOX6P35712 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 AL356309.3-201ENST00000624132 1934 ntBASIC16.05■□□□□ 0.16
SOX6P35712 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX6P35712 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX6P35712 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SOX6P35712 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX6P35712 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX6P35712 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SOX6P35712 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX6P35712 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX6P35712 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms