Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPRP12270 KRT8P47-201ENST00000604727 1398 ntBASIC16.69■□□□□ 0.26
TPRP12270 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TPRP12270 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPRP12270 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TPRP12270 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TPRP12270 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.69■□□□□ 0.26
TPRP12270 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.69■□□□□ 0.26
TPRP12270 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.69■□□□□ 0.26
TPRP12270 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPRP12270 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.69■□□□□ 0.26
TPRP12270 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPRP12270 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPRP12270 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPRP12270 AC008677.1-201ENST00000519230 1561 ntBASIC16.69■□□□□ 0.26
TPRP12270 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPRP12270 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPRP12270 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TPRP12270 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TPRP12270 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.69■□□□□ 0.26
TPRP12270 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPRP12270 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPRP12270 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPRP12270 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.69■□□□□ 0.26
TPRP12270 AC019129.2-201ENST00000609837 1235 ntBASIC16.69■□□□□ 0.26
TPRP12270 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.69■□□□□ 0.26
TPRP12270 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.68■□□□□ 0.26
TPRP12270 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.68■□□□□ 0.26
TPRP12270 KRT8P50-201ENST00000562022 1438 ntBASIC16.68■□□□□ 0.26
TPRP12270 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.68■□□□□ 0.26
TPRP12270 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.68■□□□□ 0.26
TPRP12270 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TPRP12270 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 AC009118.2-201ENST00000613275 655 ntBASIC16.68■□□□□ 0.26
TPRP12270 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TPRP12270 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TPRP12270 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.68■□□□□ 0.26
TPRP12270 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TPRP12270 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TPRP12270 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPRP12270 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TPRP12270 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.67■□□□□ 0.26
TPRP12270 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.67■□□□□ 0.26
TPRP12270 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
TPRP12270 AC092933.1-201ENST00000393644 945 ntBASIC16.67■□□□□ 0.26
TPRP12270 HAUS4P1-201ENST00000406739 1145 ntBASIC16.67■□□□□ 0.26
TPRP12270 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.67■□□□□ 0.26
TPRP12270 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.67■□□□□ 0.26
TPRP12270 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.67■□□□□ 0.26
TPRP12270 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.67■□□□□ 0.26
TPRP12270 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.67■□□□□ 0.26
TPRP12270 AC007064.4-201ENST00000637740 555 ntBASIC16.67■□□□□ 0.26
TPRP12270 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPRP12270 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TPRP12270 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TPRP12270 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPRP12270 TUBB3P1-201ENST00000405796 1332 ntBASIC16.67■□□□□ 0.26
TPRP12270 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPRP12270 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPRP12270 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TPRP12270 AL592309.1-201ENST00000443127 649 ntBASIC16.67■□□□□ 0.26
TPRP12270 AC004890.2-204ENST00000481968 304 ntBASIC16.67■□□□□ 0.26
TPRP12270 AC125807.1-201ENST00000483097 614 ntBASIC16.67■□□□□ 0.26
TPRP12270 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TPRP12270 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
TPRP12270 RAB43P1-201ENST00000561790 589 ntBASIC16.67■□□□□ 0.26
TPRP12270 TP53TG3HP-202ENST00000569755 579 ntBASIC16.67■□□□□ 0.26
TPRP12270 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.67■□□□□ 0.26
TPRP12270 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.67■□□□□ 0.26
TPRP12270 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.67■□□□□ 0.26
TPRP12270 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
TPRP12270 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.67■□□□□ 0.26
TPRP12270 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPRP12270 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPRP12270 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TPRP12270 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TPRP12270 AC074386.1-202ENST00000463561 864 ntBASIC16.66■□□□□ 0.26
TPRP12270 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.66■□□□□ 0.26
TPRP12270 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.66■□□□□ 0.26
TPRP12270 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TPRP12270 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.66■□□□□ 0.26
TPRP12270 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TPRP12270 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.66■□□□□ 0.26
TPRP12270 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.66■□□□□ 0.26
TPRP12270 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPRP12270 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPRP12270 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TPRP12270 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms