Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
KRT3P12035 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT3P12035 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.87■□□□□ 0.61
KRT3P12035 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.87■□□□□ 0.61
KRT3P12035 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT3P12035 AC026471.1-201ENST00000564629 3026 ntBASIC18.87■□□□□ 0.61
KRT3P12035 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT3P12035 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT3P12035 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT3P12035 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
KRT3P12035 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
KRT3P12035 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT3P12035 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
KRT3P12035 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT3P12035 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT3P12035 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT3P12035 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT3P12035 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT3P12035 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT3P12035 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
KRT3P12035 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
KRT3P12035 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT3P12035 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT3P12035 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT3P12035 AL049597.2-201ENST00000565575 961 ntBASIC18.86■□□□□ 0.61
KRT3P12035 RNF126P1-202ENST00000569893 925 ntBASIC18.86■□□□□ 0.61
KRT3P12035 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT3P12035 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT3P12035 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT3P12035 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT3P12035 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
KRT3P12035 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
KRT3P12035 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KRT3P12035 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.85■□□□□ 0.61
KRT3P12035 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT3P12035 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT3P12035 AL390719.2-201ENST00000606993 987 ntBASIC18.85■□□□□ 0.61
KRT3P12035 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT3P12035 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
KRT3P12035 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
KRT3P12035 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 Z83836.1-201ENST00000624605 1642 ntBASIC18.85■□□□□ 0.61
KRT3P12035 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
KRT3P12035 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KRT3P12035 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT3P12035 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.84■□□□□ 0.61
KRT3P12035 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT3P12035 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
KRT3P12035 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
KRT3P12035 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT3P12035 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT3P12035 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT3P12035 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT3P12035 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT3P12035 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT3P12035 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.84■□□□□ 0.61
KRT3P12035 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT3P12035 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
KRT3P12035 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT3P12035 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.84■□□□□ 0.61
KRT3P12035 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT3P12035 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT3P12035 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT3P12035 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT3P12035 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT3P12035 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.83■□□□□ 0.61
KRT3P12035 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms