Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 ABCD1P5-201ENST00000445663 754 ntBASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 AC018712.1-201ENST00000455767 687 ntBASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 RNPS1P1-201ENST00000507437 918 ntBASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 AP001269.4-201ENST00000609611 512 ntBASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 AC097374.2-201ENST00000618617 1306 ntBASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 AP005117.1-201ENST00000584346 1413 ntBASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40ALP0C0E4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB40ALP0C0E4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB40ALP0C0E4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.83■□□□□ 0.29
RAB40ALP0C0E4 BCL2-203ENST00000589955 5011 ntBASIC16.83■□□□□ 0.29
RAB40ALP0C0E4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RAB40ALP0C0E4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 RPS2P28-201ENST00000314255 741 ntBASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 IL9RP2-201ENST00000423948 1312 ntBASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40ALP0C0E4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 AL031598.1-201ENST00000561511 1773 ntBASIC16.82■□□□□ 0.28
RAB40ALP0C0E4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms