Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.99■□□□□ 0.47
MMP2P08253 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.99■□□□□ 0.47
MMP2P08253 AC092119.3-201ENST00000612618 583 ntBASIC17.99■□□□□ 0.47
MMP2P08253 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.99■□□□□ 0.47
MMP2P08253 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.99■□□□□ 0.47
MMP2P08253 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP2P08253 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
MMP2P08253 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
MMP2P08253 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.98■□□□□ 0.47
MMP2P08253 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.98■□□□□ 0.47
MMP2P08253 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
MMP2P08253 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP2P08253 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
MMP2P08253 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP2P08253 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.98■□□□□ 0.47
MMP2P08253 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.98■□□□□ 0.47
MMP2P08253 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.98■□□□□ 0.47
MMP2P08253 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP2P08253 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.98■□□□□ 0.47
MMP2P08253 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
MMP2P08253 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.98■□□□□ 0.47
MMP2P08253 AC093458.2-201ENST00000623150 629 ntBASIC17.98■□□□□ 0.47
MMP2P08253 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP2P08253 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
MMP2P08253 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
MMP2P08253 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
MMP2P08253 AIRN-201ENST00000601203 4374 ntBASIC17.98■□□□□ 0.47
MMP2P08253 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
MMP2P08253 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MMP2P08253 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP2P08253 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.98■□□□□ 0.47
MMP2P08253 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.98■□□□□ 0.47
MMP2P08253 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.98■□□□□ 0.47
MMP2P08253 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.98■□□□□ 0.47
MMP2P08253 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP2P08253 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
MMP2P08253 LINC00304-203ENST00000565008 1864 ntBASIC17.97■□□□□ 0.47
MMP2P08253 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.97■□□□□ 0.47
MMP2P08253 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.97■□□□□ 0.47
MMP2P08253 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.97■□□□□ 0.47
MMP2P08253 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP2P08253 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP2P08253 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MMP2P08253 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.97■□□□□ 0.47
MMP2P08253 AC007967.3-201ENST00000434308 558 ntBASIC17.97■□□□□ 0.47
MMP2P08253 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.97■□□□□ 0.47
MMP2P08253 LINC00265-3P-201ENST00000447588 903 ntBASIC17.97■□□□□ 0.47
MMP2P08253 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.97■□□□□ 0.47
MMP2P08253 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.97■□□□□ 0.47
MMP2P08253 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.97■□□□□ 0.47
MMP2P08253 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MMP2P08253 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.97■□□□□ 0.47
MMP2P08253 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MMP2P08253 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.97■□□□□ 0.47
MMP2P08253 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.97■□□□□ 0.47
MMP2P08253 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP2P08253 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP2P08253 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.97■□□□□ 0.47
MMP2P08253 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.97■□□□□ 0.47
MMP2P08253 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MMP2P08253 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
MMP2P08253 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP2P08253 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.96■□□□□ 0.47
MMP2P08253 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP2P08253 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP2P08253 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.96■□□□□ 0.47
MMP2P08253 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.96■□□□□ 0.47
MMP2P08253 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.96■□□□□ 0.47
MMP2P08253 IGHV3-47-201ENST00000425060 335 ntBASIC17.96■□□□□ 0.47
MMP2P08253 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP2P08253 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP2P08253 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.96■□□□□ 0.47
MMP2P08253 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MMP2P08253 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.96■□□□□ 0.47
MMP2P08253 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.96■□□□□ 0.47
MMP2P08253 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.96■□□□□ 0.47
MMP2P08253 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
MMP2P08253 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MMP2P08253 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.96■□□□□ 0.47
MMP2P08253 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms