Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC3P02656 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 CICP13-201ENST00000422015 2789 ntBASIC14.39□□□□□ -0.11
APOC3P02656 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOC3P02656 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC3P02656 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC3P02656 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 AC133561.4-201ENST00000566112 224 ntBASIC14.39□□□□□ -0.11
APOC3P02656 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
APOC3P02656 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
APOC3P02656 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 MTMR9LP-203ENST00000426597 1545 ntBASIC14.39□□□□□ -0.11
APOC3P02656 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
APOC3P02656 AC060834.1-201ENST00000443027 2032 ntBASIC14.39□□□□□ -0.11
APOC3P02656 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.39□□□□□ -0.11
APOC3P02656 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.39□□□□□ -0.11
APOC3P02656 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.39□□□□□ -0.11
APOC3P02656 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
APOC3P02656 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC3P02656 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
APOC3P02656 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC3P02656 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.38□□□□□ -0.11
APOC3P02656 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
APOC3P02656 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.38□□□□□ -0.11
APOC3P02656 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.38□□□□□ -0.11
APOC3P02656 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC3P02656 MIR7108-201ENST00000614319 87 ntBASIC14.38□□□□□ -0.11
APOC3P02656 AL358852.1-201ENST00000623174 1268 ntBASIC14.38□□□□□ -0.11
APOC3P02656 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.38□□□□□ -0.11
APOC3P02656 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC3P02656 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC3P02656 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
APOC3P02656 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
APOC3P02656 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC3P02656 CICP4-201ENST00000447359 2812 ntBASIC14.37□□□□□ -0.11
APOC3P02656 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.37□□□□□ -0.11
APOC3P02656 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.37□□□□□ -0.11
APOC3P02656 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.37□□□□□ -0.11
APOC3P02656 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
APOC3P02656 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.37□□□□□ -0.11
APOC3P02656 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.37□□□□□ -0.11
APOC3P02656 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.37□□□□□ -0.11
APOC3P02656 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 AC133963.1-201ENST00000504166 1679 ntBASIC14.37□□□□□ -0.11
APOC3P02656 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC3P02656 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.37□□□□□ -0.11
APOC3P02656 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.37□□□□□ -0.11
APOC3P02656 CDV3P1-201ENST00000471403 739 ntBASIC14.37□□□□□ -0.11
APOC3P02656 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.37□□□□□ -0.11
APOC3P02656 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.37□□□□□ -0.11
APOC3P02656 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.37□□□□□ -0.11
APOC3P02656 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms