Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 ECEL1P2-202ENST00000465689 757 ntBASIC16.1■□□□□ 0.17
HLA-DQA2P01906 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 AC010947.1-201ENST00000623454 693 ntBASIC16.1■□□□□ 0.17
HLA-DQA2P01906 AC092865.7-201ENST00000641832 219 ntBASIC16.1■□□□□ 0.17
HLA-DQA2P01906 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.09■□□□□ 0.17
HLA-DQA2P01906 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 HMGA1P5-201ENST00000412453 271 ntBASIC16.09■□□□□ 0.17
HLA-DQA2P01906 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 AC106820.2-201ENST00000563775 3264 ntBASIC16.09■□□□□ 0.17
HLA-DQA2P01906 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQA2P01906 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DQA2P01906 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DQA2P01906 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DQA2P01906 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DQA2P01906 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DQA2P01906 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DQA2P01906 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DQA2P01906 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 SEC1P-202ENST00000473944 940 ntBASIC16.08■□□□□ 0.16
HLA-DQA2P01906 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
HLA-DQA2P01906 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms