Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LTN1O94822 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC23.51■■□□□ 1.35
LTN1O94822 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC23.51■■□□□ 1.35
LTN1O94822 AC005829.1-201ENST00000570002 483 ntBASIC23.51■■□□□ 1.35
LTN1O94822 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
LTN1O94822 AC004790.2-201ENST00000623588 572 ntBASIC23.51■■□□□ 1.35
LTN1O94822 C20orf181-201ENST00000623918 480 ntBASIC23.51■■□□□ 1.35
LTN1O94822 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LTN1O94822 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LTN1O94822 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LTN1O94822 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
LTN1O94822 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC23.51■■□□□ 1.35
LTN1O94822 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
LTN1O94822 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.51■■□□□ 1.35
LTN1O94822 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LTN1O94822 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC23.51■■□□□ 1.35
LTN1O94822 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
LTN1O94822 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC23.51■■□□□ 1.35
LTN1O94822 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
LTN1O94822 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC23.5■■□□□ 1.35
LTN1O94822 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LTN1O94822 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
LTN1O94822 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC23.5■■□□□ 1.35
LTN1O94822 AP000344.2-201ENST00000512987 629 ntBASIC23.5■■□□□ 1.35
LTN1O94822 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC23.5■■□□□ 1.35
LTN1O94822 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
LTN1O94822 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LTN1O94822 PC-214ENST00000628663 1470 ntTSL 5 BASIC23.5■■□□□ 1.35
LTN1O94822 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LTN1O94822 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
LTN1O94822 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LTN1O94822 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LTN1O94822 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LTN1O94822 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
LTN1O94822 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC23.5■■□□□ 1.35
LTN1O94822 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
LTN1O94822 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
LTN1O94822 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
LTN1O94822 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LTN1O94822 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LTN1O94822 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.5■■□□□ 1.35
LTN1O94822 PNMT-202ENST00000394246 821 ntTSL 2 BASIC23.5■■□□□ 1.35
LTN1O94822 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.5■■□□□ 1.35
LTN1O94822 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC23.5■■□□□ 1.35
LTN1O94822 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LTN1O94822 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LTN1O94822 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
LTN1O94822 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
LTN1O94822 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC23.49■■□□□ 1.35
LTN1O94822 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LTN1O94822 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC23.49■■□□□ 1.35
LTN1O94822 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LTN1O94822 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC23.49■■□□□ 1.35
LTN1O94822 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.49■■□□□ 1.35
LTN1O94822 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LTN1O94822 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LTN1O94822 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LTN1O94822 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
LTN1O94822 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
LTN1O94822 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LTN1O94822 AP002414.1-201ENST00000391405 1147 ntBASIC23.49■■□□□ 1.35
LTN1O94822 SIGLEC30P-201ENST00000455569 941 ntBASIC23.49■■□□□ 1.35
LTN1O94822 RFPL4AP1-201ENST00000530883 850 ntBASIC23.49■■□□□ 1.35
LTN1O94822 KRT19P2-202ENST00000557173 1012 ntBASIC23.49■■□□□ 1.35
LTN1O94822 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC23.49■■□□□ 1.35
LTN1O94822 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
LTN1O94822 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC23.49■■□□□ 1.35
LTN1O94822 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LTN1O94822 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LTN1O94822 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LTN1O94822 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23.48■■□□□ 1.35
LTN1O94822 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LTN1O94822 AC135776.1-201ENST00000319817 2481 ntBASIC23.48■■□□□ 1.35
LTN1O94822 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LTN1O94822 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LTN1O94822 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
LTN1O94822 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC23.48■■□□□ 1.35
LTN1O94822 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
LTN1O94822 ATP6V0CP3-201ENST00000417255 467 ntBASIC23.48■■□□□ 1.35
LTN1O94822 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.48■■□□□ 1.35
LTN1O94822 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC23.48■■□□□ 1.35
LTN1O94822 MIR4469-201ENST00000583919 79 ntBASIC23.48■■□□□ 1.35
LTN1O94822 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC23.48■■□□□ 1.35
LTN1O94822 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
LTN1O94822 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
LTN1O94822 GOLGA6L17P-202ENST00000614358 1398 ntBASIC23.48■■□□□ 1.35
LTN1O94822 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LTN1O94822 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LTN1O94822 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC23.48■■□□□ 1.35
LTN1O94822 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.48■■□□□ 1.35
LTN1O94822 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC23.47■■□□□ 1.35
LTN1O94822 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
LTN1O94822 CD82-202ENST00000342935 967 ntTSL 5 BASIC23.47■■□□□ 1.35
LTN1O94822 METTL26-205ENST00000397666 726 ntTSL 2 BASIC23.47■■□□□ 1.35
LTN1O94822 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms