Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AL136038.3-201ENST00000561909 1096 ntBASIC18.61■□□□□ 0.57
LRCH4O75427 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH4O75427 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.61■□□□□ 0.57
LRCH4O75427 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH4O75427 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH4O75427 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH4O75427 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH4O75427 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH4O75427 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRCH4O75427 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.6■□□□□ 0.57
LRCH4O75427 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.6■□□□□ 0.57
LRCH4O75427 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
LRCH4O75427 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRCH4O75427 AL031133.1-201ENST00000406807 723 ntBASIC18.6■□□□□ 0.57
LRCH4O75427 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.6■□□□□ 0.57
LRCH4O75427 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.6■□□□□ 0.57
LRCH4O75427 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.6■□□□□ 0.57
LRCH4O75427 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.6■□□□□ 0.57
LRCH4O75427 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
LRCH4O75427 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.6■□□□□ 0.57
LRCH4O75427 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH4O75427 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.6■□□□□ 0.57
LRCH4O75427 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRCH4O75427 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.59■□□□□ 0.57
LRCH4O75427 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.59■□□□□ 0.57
LRCH4O75427 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.59■□□□□ 0.57
LRCH4O75427 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.59■□□□□ 0.57
LRCH4O75427 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.59■□□□□ 0.57
LRCH4O75427 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.59■□□□□ 0.57
LRCH4O75427 AL049597.2-201ENST00000565575 961 ntBASIC18.59■□□□□ 0.57
LRCH4O75427 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.59■□□□□ 0.57
LRCH4O75427 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.59■□□□□ 0.57
LRCH4O75427 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.59■□□□□ 0.57
LRCH4O75427 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.59■□□□□ 0.57
LRCH4O75427 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LRCH4O75427 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH4O75427 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRCH4O75427 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRCH4O75427 AC139713.2-201ENST00000641328 2723 ntBASIC18.58■□□□□ 0.57
LRCH4O75427 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.58■□□□□ 0.57
LRCH4O75427 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
LRCH4O75427 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRCH4O75427 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
LRCH4O75427 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.58■□□□□ 0.57
LRCH4O75427 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRCH4O75427 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
LRCH4O75427 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH4O75427 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH4O75427 TSPY22P-201ENST00000427496 604 ntBASIC18.58■□□□□ 0.56
LRCH4O75427 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH4O75427 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.58■□□□□ 0.56
LRCH4O75427 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH4O75427 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LRCH4O75427 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH4O75427 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH4O75427 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH4O75427 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH4O75427 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.58■□□□□ 0.56
LRCH4O75427 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LRCH4O75427 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms