Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX3O60493 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 AL024508.2-201ENST00000607749 1894 ntBASIC17.63■□□□□ 0.41
SNX3O60493 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SNX3O60493 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SNX3O60493 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX3O60493 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SNX3O60493 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 AC036111.1-201ENST00000533973 1582 ntBASIC17.62■□□□□ 0.41
SNX3O60493 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 GPAT2P1-201ENST00000444924 1672 ntBASIC17.62■□□□□ 0.41
SNX3O60493 AC116353.5-201ENST00000638148 1699 ntBASIC17.62■□□□□ 0.41
SNX3O60493 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SNX3O60493 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX3O60493 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SNX3O60493 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.62■□□□□ 0.41
SNX3O60493 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SNX3O60493 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.62■□□□□ 0.41
SNX3O60493 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX3O60493 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX3O60493 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
SNX3O60493 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SNX3O60493 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX3O60493 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SNX3O60493 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
SNX3O60493 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SNX3O60493 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX3O60493 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX3O60493 AC004951.3-201ENST00000418645 1148 ntBASIC17.61■□□□□ 0.41
SNX3O60493 POM121L13P-201ENST00000422362 380 ntBASIC17.61■□□□□ 0.41
SNX3O60493 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.61■□□□□ 0.41
SNX3O60493 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.61■□□□□ 0.41
SNX3O60493 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX3O60493 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.61■□□□□ 0.41
SNX3O60493 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SNX3O60493 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.61■□□□□ 0.41
SNX3O60493 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX3O60493 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SNX3O60493 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SNX3O60493 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX3O60493 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX3O60493 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX3O60493 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.6■□□□□ 0.41
SNX3O60493 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.6■□□□□ 0.41
SNX3O60493 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.6■□□□□ 0.41
SNX3O60493 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.6■□□□□ 0.41
SNX3O60493 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SNX3O60493 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms