Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 AC008764.6-201ENST00000595909 2069 ntBASIC20.54■□□□□ 0.88
CYTH3O43739 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYTH3O43739 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYTH3O43739 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.54■□□□□ 0.88
CYTH3O43739 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYTH3O43739 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.54■□□□□ 0.88
CYTH3O43739 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.54■□□□□ 0.88
CYTH3O43739 REXO1L6P-202ENST00000619970 1078 ntBASIC20.54■□□□□ 0.88
CYTH3O43739 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.54■□□□□ 0.88
CYTH3O43739 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CYTH3O43739 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYTH3O43739 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYTH3O43739 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CYTH3O43739 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CYTH3O43739 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.54■□□□□ 0.88
CYTH3O43739 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYTH3O43739 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYTH3O43739 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYTH3O43739 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYTH3O43739 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYTH3O43739 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.53■□□□□ 0.88
CYTH3O43739 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.53■□□□□ 0.88
CYTH3O43739 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CYTH3O43739 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.53■□□□□ 0.88
CYTH3O43739 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CYTH3O43739 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CYTH3O43739 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 FAM220CP-201ENST00000395253 831 ntBASIC20.53■□□□□ 0.88
CYTH3O43739 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 AF238378.1-201ENST00000526806 358 ntBASIC20.53■□□□□ 0.88
CYTH3O43739 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.53■□□□□ 0.88
CYTH3O43739 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CYTH3O43739 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.53■□□□□ 0.88
CYTH3O43739 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.53■□□□□ 0.88
CYTH3O43739 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.53■□□□□ 0.88
CYTH3O43739 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.53■□□□□ 0.88
CYTH3O43739 AC012317.2-201ENST00000623305 2251 ntBASIC20.53■□□□□ 0.88
CYTH3O43739 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.53■□□□□ 0.88
CYTH3O43739 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CYTH3O43739 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
CYTH3O43739 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.53■□□□□ 0.88
CYTH3O43739 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYTH3O43739 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.53■□□□□ 0.88
CYTH3O43739 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CYTH3O43739 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.52■□□□□ 0.88
CYTH3O43739 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.52■□□□□ 0.88
CYTH3O43739 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.52■□□□□ 0.88
CYTH3O43739 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.52■□□□□ 0.88
CYTH3O43739 AC006116.8-202ENST00000587620 1550 ntBASIC20.52■□□□□ 0.88
CYTH3O43739 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CYTH3O43739 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CYTH3O43739 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CYTH3O43739 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.52■□□□□ 0.88
CYTH3O43739 DDX43P3-201ENST00000441064 443 ntBASIC20.52■□□□□ 0.88
CYTH3O43739 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.52■□□□□ 0.88
CYTH3O43739 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.52■□□□□ 0.88
CYTH3O43739 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 AP001269.4-201ENST00000609611 512 ntBASIC20.52■□□□□ 0.88
CYTH3O43739 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.52■□□□□ 0.88
CYTH3O43739 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CYTH3O43739 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.52■□□□□ 0.88
CYTH3O43739 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYTH3O43739 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.52■□□□□ 0.87
CYTH3O43739 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.52■□□□□ 0.87
CYTH3O43739 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.52■□□□□ 0.87
CYTH3O43739 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.52■□□□□ 0.87
CYTH3O43739 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CYTH3O43739 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CYTH3O43739 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CYTH3O43739 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CYTH3O43739 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYTH3O43739 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CYTH3O43739 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.51■□□□□ 0.87
CYTH3O43739 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYTH3O43739 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.51■□□□□ 0.87
CYTH3O43739 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 511 ms