Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 AC105265.2-201ENST00000467189 838 ntBASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 CDV3P1-201ENST00000471403 739 ntBASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 HMGB3P14-201ENST00000494195 599 ntBASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 PAX6-247ENST00000638965 979 ntTSL 5 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM238LA0A1B0GVL6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 PTCHD3P2-201ENST00000424937 1205 ntBASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 AC136469.2-201ENST00000623944 1028 ntBASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.56□□□□□ -0.4
TMEM238LA0A1B0GVL6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
TMEM238LA0A1B0GVL6 SDHAP1-207ENST00000440850 2000 ntBASIC12.55□□□□□ -0.4
TMEM238LA0A1B0GVL6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms