Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 AC245052.3-201ENST00000450182 901 ntBASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 OR2I1P-207ENST00000453522 948 ntBASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 FAM21FP-204ENST00000608637 956 ntBASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 MIR6722-201ENST00000617286 78 ntBASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 AC060834.1-201ENST00000443027 2032 ntBASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC9.25□□□□□ -0.93
LINC01558Q9Y6Z2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 PPP1R26P4-201ENST00000619065 3527 ntBASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 AC126335.2-201ENST00000623362 4637 ntBASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms