Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC097374.2-201ENST00000618617 1306 ntBASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA4Q9UN74 AC125634.1-201ENST00000438758 1403 ntBASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 AC134043.2-201ENST00000624206 2238 ntBASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 AC092329.2-201ENST00000598402 547 ntBASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 AL138831.2-201ENST00000606564 490 ntBASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHA4Q9UN74 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 Z69720.1-201ENST00000601483 472 ntBASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA4Q9UN74 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 AC067852.2-201ENST00000590513 2313 ntBASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 KRT17P6-201ENST00000453795 1220 ntBASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHA4Q9UN74 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PCDHA4Q9UN74 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms