Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD9Q9P000 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD9Q9P000 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD9Q9P000 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.31■□□□□ 0.04
COMMD9Q9P000 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD9Q9P000 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD9Q9P000 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD9Q9P000 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD9Q9P000 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD9Q9P000 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD9Q9P000 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COMMD9Q9P000 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD9Q9P000 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.3■□□□□ 0.04
COMMD9Q9P000 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.3■□□□□ 0.04
COMMD9Q9P000 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.3■□□□□ 0.04
COMMD9Q9P000 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COMMD9Q9P000 KRT8P41-201ENST00000533985 1514 ntBASIC15.3■□□□□ 0.04
COMMD9Q9P000 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.3■□□□□ 0.04
COMMD9Q9P000 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.3■□□□□ 0.04
COMMD9Q9P000 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
COMMD9Q9P000 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COMMD9Q9P000 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 KRT17P3-201ENST00000420566 1262 ntBASIC15.29■□□□□ 0.04
COMMD9Q9P000 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 AP003097.1-201ENST00000530657 1135 ntBASIC15.29■□□□□ 0.04
COMMD9Q9P000 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 AC069544.1-201ENST00000609399 999 ntBASIC15.29■□□□□ 0.04
COMMD9Q9P000 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD9Q9P000 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.29■□□□□ 0.04
COMMD9Q9P000 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD9Q9P000 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.28■□□□□ 0.04
COMMD9Q9P000 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.28■□□□□ 0.04
COMMD9Q9P000 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
COMMD9Q9P000 MTMR9LP-203ENST00000426597 1545 ntBASIC15.28■□□□□ 0.04
COMMD9Q9P000 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
COMMD9Q9P000 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD9Q9P000 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.28■□□□□ 0.04
COMMD9Q9P000 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD9Q9P000 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.28■□□□□ 0.04
COMMD9Q9P000 LINC00602-201ENST00000629776 2065 ntBASIC15.28■□□□□ 0.04
COMMD9Q9P000 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD9Q9P000 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD9Q9P000 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD9Q9P000 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD9Q9P000 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
COMMD9Q9P000 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.28■□□□□ 0.04
COMMD9Q9P000 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD9Q9P000 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD9Q9P000 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.28■□□□□ 0.04
COMMD9Q9P000 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
COMMD9Q9P000 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.28■□□□□ 0.04
COMMD9Q9P000 MTDHP1-201ENST00000605323 784 ntBASIC15.28■□□□□ 0.04
COMMD9Q9P000 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms