Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 AC069148.1-201ENST00000608741 768 ntBASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 IGHV3-41-201ENST00000613121 348 ntBASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.03■□□□□ 0.16
PARPBPQ9NWS1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 AL096828.2-201ENST00000567259 1965 ntBASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 CHCHD2P8-201ENST00000429873 447 ntBASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.02■□□□□ 0.16
PARPBPQ9NWS1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PARPBPQ9NWS1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PARPBPQ9NWS1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.02■□□□□ 0.15
PARPBPQ9NWS1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PARPBPQ9NWS1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PARPBPQ9NWS1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PARPBPQ9NWS1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PARPBPQ9NWS1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
PARPBPQ9NWS1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PARPBPQ9NWS1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.01■□□□□ 0.15
PARPBPQ9NWS1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.01■□□□□ 0.15
PARPBPQ9NWS1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
PARPBPQ9NWS1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PARPBPQ9NWS1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PARPBPQ9NWS1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PARPBPQ9NWS1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms