Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 AC105339.3-201ENST00000560043 636 ntBASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 AC139530.3-201ENST00000620344 690 ntBASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 AC073592.4-201ENST00000623827 446 ntBASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO28Q9NVF7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 KRT18P13-201ENST00000400056 1290 ntBASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 PMS2P7-201ENST00000506558 1336 ntBASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FBXO28Q9NVF7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 BX323043.1-201ENST00000641006 1765 ntBASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 PGAM5P1-201ENST00000518923 814 ntBASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 AC073592.5-201ENST00000624854 528 ntBASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 AL022326.1-202ENST00000641533 845 ntBASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 AC004408.2-201ENST00000623613 2777 ntBASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
FBXO28Q9NVF7 REXO1L9P-201ENST00000604264 2108 ntBASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 SPDYE21P-201ENST00000413323 827 ntBASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 LAGE3P1-201ENST00000425356 484 ntBASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 AC092865.5-201ENST00000545435 363 ntBASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 AC140113.2-201ENST00000604370 208 ntBASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 Z83851.2-201ENST00000609564 659 ntBASIC20.48■□□□□ 0.87
FBXO28Q9NVF7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms