Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 AC096633.1-201ENST00000422446 749 ntBASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 AC125634.1-201ENST00000438758 1403 ntBASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 AC097374.2-201ENST00000618617 1306 ntBASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 DDX43P3-201ENST00000441064 443 ntBASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 LINC00265-3P-201ENST00000447588 903 ntBASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 AL138831.2-201ENST00000606564 490 ntBASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
ECHDC1Q9NTX5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 VENTXP7-201ENST00000475503 772 ntBASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 AC092329.2-201ENST00000598402 547 ntBASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ECHDC1Q9NTX5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 Z69720.1-201ENST00000601483 472 ntBASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms