Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 AC118758.2-201ENST00000614242 2813 ntBASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
CDC42SE1Q9NRR8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC9.15□□□□□ -0.95
CDC42SE1Q9NRR8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC9.15□□□□□ -0.95
CDC42SE1Q9NRR8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CDC42SE1Q9NRR8 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
CDC42SE1Q9NRR8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
CDC42SE1Q9NRR8 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.95
CDC42SE1Q9NRR8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
CDC42SE1Q9NRR8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
CDC42SE1Q9NRR8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CDC42SE1Q9NRR8 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 ABR-205ENST00000544583 5595 ntTSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 BX005040.4-201ENST00000637145 1518 ntBASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CDC42SE1Q9NRR8 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 AL139385.1-201ENST00000611744 3272 ntBASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms