Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HPS4Q9NQG7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HPS4Q9NQG7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
HPS4Q9NQG7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 AP005117.1-201ENST00000584346 1413 ntBASIC18.51■□□□□ 0.55
HPS4Q9NQG7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 AC106730.1-201ENST00000566722 1090 ntBASIC18.51■□□□□ 0.55
HPS4Q9NQG7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS4Q9NQG7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 SART3-203ENST00000546611 1184 ntBASIC18.5■□□□□ 0.55
HPS4Q9NQG7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 AC117500.6-201ENST00000624871 588 ntBASIC18.5■□□□□ 0.55
HPS4Q9NQG7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
HPS4Q9NQG7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 ABCD1P5-201ENST00000445663 754 ntBASIC18.49■□□□□ 0.55
HPS4Q9NQG7 AC112698.1-201ENST00000510299 916 ntBASIC18.49■□□□□ 0.55
HPS4Q9NQG7 KRT18P58-201ENST00000527480 1120 ntBASIC18.49■□□□□ 0.55
HPS4Q9NQG7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 AC021087.4-201ENST00000563761 564 ntBASIC18.49■□□□□ 0.55
HPS4Q9NQG7 AC116407.3-201ENST00000623905 1129 ntBASIC18.49■□□□□ 0.55
HPS4Q9NQG7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.49■□□□□ 0.55
HPS4Q9NQG7 ANO7L1-203ENST00000602586 1720 ntBASIC18.49■□□□□ 0.55
HPS4Q9NQG7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms