Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC006557.6-201ENST00000623071 864 ntBASIC21.16■□□□□ 0.98
RTN4Q9NQC3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 PKD1P5-201ENST00000532415 10291 ntBASIC21.16■□□□□ 0.98
RTN4Q9NQC3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 RPS2P52-201ENST00000469610 820 ntBASIC21.15■□□□□ 0.98
RTN4Q9NQC3 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RTN4Q9NQC3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
RTN4Q9NQC3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTN4Q9NQC3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTN4Q9NQC3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTN4Q9NQC3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC21.14■□□□□ 0.98
RTN4Q9NQC3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTN4Q9NQC3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.14■□□□□ 0.98
RTN4Q9NQC3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RTN4Q9NQC3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RTN4Q9NQC3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RTN4Q9NQC3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
RTN4Q9NQC3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 RAP2CP1-201ENST00000605103 478 ntBASIC21.14■□□□□ 0.97
RTN4Q9NQC3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 AGGF1P2-201ENST00000426656 2106 ntBASIC21.14■□□□□ 0.97
RTN4Q9NQC3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 AL121761.2-201ENST00000598007 1648 ntBASIC21.14■□□□□ 0.97
RTN4Q9NQC3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4Q9NQC3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 MIPEPP3-201ENST00000412105 444 ntBASIC21.13■□□□□ 0.97
RTN4Q9NQC3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 AL023806.1-201ENST00000603994 1649 ntBASIC21.13■□□□□ 0.97
RTN4Q9NQC3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms