Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 KRT16P5-201ENST00000455284 522 ntBASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 UNC93B5-201ENST00000530315 699 ntBASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SND1-IT1Q9HBX3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.02□□□□□ -0.48
SND1-IT1Q9HBX3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
SND1-IT1Q9HBX3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SND1-IT1Q9HBX3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SND1-IT1Q9HBX3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SND1-IT1Q9HBX3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
SND1-IT1Q9HBX3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.02□□□□□ -0.48
SND1-IT1Q9HBX3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SND1-IT1Q9HBX3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SND1-IT1Q9HBX3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.02□□□□□ -0.48
SND1-IT1Q9HBX3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SND1-IT1Q9HBX3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SND1-IT1Q9HBX3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 AL139384.1-201ENST00000612143 3047 ntBASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 AP000593.1-201ENST00000393668 712 ntBASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 MTDHP1-201ENST00000605323 784 ntBASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 AC008894.3-201ENST00000624324 3103 ntBASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SND1-IT1Q9HBX3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 AL109659.2-201ENST00000606809 1674 ntBASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms