Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 GPR32P1-201ENST00000601788 811 ntBASIC17.14■□□□□ 0.33
BRF2Q9HAW0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 KRT8P47-201ENST00000604727 1398 ntBASIC17.14■□□□□ 0.33
BRF2Q9HAW0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 AC009949.1-201ENST00000623048 1830 ntBASIC17.13■□□□□ 0.33
BRF2Q9HAW0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 AC112907.2-201ENST00000448639 330 ntBASIC17.13■□□□□ 0.33
BRF2Q9HAW0 AC092647.4-201ENST00000457211 535 ntBASIC17.13■□□□□ 0.33
BRF2Q9HAW0 AL359075.1-203ENST00000462729 1002 ntBASIC17.13■□□□□ 0.33
BRF2Q9HAW0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 HYMAI.1-201ENST00000620949 238 ntBASIC17.13■□□□□ 0.33
BRF2Q9HAW0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRF2Q9HAW0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 AC112698.1-201ENST00000510299 916 ntBASIC17.12■□□□□ 0.33
BRF2Q9HAW0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 LINC01451-201ENST00000623792 534 ntBASIC17.12■□□□□ 0.33
BRF2Q9HAW0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 AL353692.3-201ENST00000407031 1396 ntBASIC17.12■□□□□ 0.33
BRF2Q9HAW0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 LINC00304-203ENST00000565008 1864 ntBASIC17.12■□□□□ 0.33
BRF2Q9HAW0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRF2Q9HAW0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 AL138688.1-201ENST00000624851 1594 ntBASIC17.11■□□□□ 0.33
BRF2Q9HAW0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 HLA-J-201ENST00000462773 1622 ntBASIC17.11■□□□□ 0.33
BRF2Q9HAW0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 AC063952.2-201ENST00000498792 1227 ntBASIC17.11■□□□□ 0.33
BRF2Q9HAW0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms