Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM38AQ9H6F2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TMEM38AQ9H6F2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM38AQ9H6F2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM38AQ9H6F2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM38AQ9H6F2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM38AQ9H6F2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM38AQ9H6F2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM38AQ9H6F2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM38AQ9H6F2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM38AQ9H6F2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM38AQ9H6F2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM38AQ9H6F2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM38AQ9H6F2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 KRT8P47-201ENST00000604727 1398 ntBASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 AC141257.4-201ENST00000634557 245 ntBASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 AC136944.6-201ENST00000634818 245 ntBASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 PCDHA12-202ENST00000613593 2588 ntBASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM38AQ9H6F2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
TMEM38AQ9H6F2 LINC01568-207ENST00000641790 1380 ntBASIC16.64■□□□□ 0.26
TMEM38AQ9H6F2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM38AQ9H6F2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TMEM38AQ9H6F2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
TMEM38AQ9H6F2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM38AQ9H6F2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM38AQ9H6F2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM38AQ9H6F2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TMEM38AQ9H6F2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TMEM38AQ9H6F2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM38AQ9H6F2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM38AQ9H6F2 AL121761.2-201ENST00000598007 1648 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms