Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 AL138966.2-201ENST00000621997 464 ntBASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBB1Q9H4B7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 AC079602.3-201ENST00000623931 403 ntBASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 AC141257.4-201ENST00000634557 245 ntBASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 AC136944.6-201ENST00000634818 245 ntBASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 LINC01568-207ENST00000641790 1380 ntBASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBB1Q9H4B7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms