Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 RPL13AP23-201ENST00000480739 586 ntBASIC19.04■□□□□ 0.64
PAAF1Q9BRP4 AC122714.2-201ENST00000502787 707 ntBASIC19.04■□□□□ 0.64
PAAF1Q9BRP4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.04■□□□□ 0.64
PAAF1Q9BRP4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.04■□□□□ 0.64
PAAF1Q9BRP4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.04■□□□□ 0.64
PAAF1Q9BRP4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.04■□□□□ 0.64
PAAF1Q9BRP4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PAAF1Q9BRP4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
PAAF1Q9BRP4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.04■□□□□ 0.64
PAAF1Q9BRP4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PAAF1Q9BRP4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PAAF1Q9BRP4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 AC090164.3-201ENST00000610780 2143 ntBASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 AC106730.1-201ENST00000566722 1090 ntBASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 AC079776.2-201ENST00000641154 1609 ntBASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.03■□□□□ 0.64
PAAF1Q9BRP4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 COX5BP2-201ENST00000392354 334 ntBASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 IGHV3-22-201ENST00000520721 359 ntBASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 OR7E14P-202ENST00000530490 1290 ntBASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PAAF1Q9BRP4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PAAF1Q9BRP4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PAAF1Q9BRP4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.02■□□□□ 0.63
PAAF1Q9BRP4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.02■□□□□ 0.63
PAAF1Q9BRP4 AC009949.1-201ENST00000623048 1830 ntBASIC19.02■□□□□ 0.63
PAAF1Q9BRP4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PAAF1Q9BRP4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 PMS2P1-201ENST00000431037 1228 ntBASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 AC092910.1-201ENST00000482027 1129 ntBASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 AL020996.1-203ENST00000536896 2307 ntBASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAAF1Q9BRP4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms